Sci Rep 10, 15364 (2020). The prey follows Weibull distribution during discovering the search space to detect potential locations of its food. (20), \(FAD=0.2\), and W is a binary solution (0 or 1) that corresponded to random solutions. & SHAH, S. S.H. The diagnostic evaluation of convolutional neural network (cnn) for the assessment of chest x-ray of patients infected with covid-19. Also, WOA algorithm showed good results in all measures, unlike dataset 1, which can conclude that no algorithm can solve all kinds of problems. Transmission scenarios for middle east respiratory syndrome coronavirus (mers-cov) and how to tell them apart. Faramarzi et al.37 implement this feature via saving the previous best solutions of a prior iteration, and compared with the current ones; the solutions are modified based on the best one during the comparison stage. Comput. The whole dataset contains around 200 COVID-19 positive images and 1675 negative COVID19 images. However, the modern name is tenggiling.In Javanese it is terenggiling; and in the Philippine languages, it is goling, tanggiling, or balintong (with the same meaning).. Design incremental data augmentation strategy for COVID-19 CT data. Internet Explorer). (14)-(15) are implemented in the first half of the agents that represent the exploitation. Article MATH The experimental results and comparisons with other works are presented inResults and discussion section, while they are discussed in Discussion section Finally, the conclusion is described in Conclusion section. what medical images are commonly used for COVID-19 classification and what are the methods for COVID-19 classification. 43, 635 (2020). So, based on this motivation, we apply MPA as a feature selector from deep features that produced from CNN (largely redundant), which, accordingly minimize capacity and resources consumption and can improve the classification of COVID-19 X-ray images. One of the best methods of detecting. Highlights COVID-19 CT classification using chest tomography (CT) images. Szegedy, C. et al. Mobilenets: Efficient convolutional neural networks for mobile vision applications. all above stages are repeated until the termination criteria is satisfied. In my thesis project, I developed an image classification model to detect COVID-19 on chest X-ray medical data using deep learning models such . Multimedia Tools Appl. The GL in the discrete-time form can be modeled as below: where T is the sampling period, and m is the length of the memory terms (memory window). 101, 646667 (2019). In Inception, there are different sizes scales convolutions (conv. (18)(19) for the second half (predator) as represented below. Comput. Table4 show classification accuracy of FO-MPA compared to other feature selection algorithms, where the best, mean, and STD for classification accuracy were calculated for each one, besides time consumption and the number of selected features (SF). Stage 2 has been executed in the second third of the total number of iterations when \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\). The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in a credit line to the material. Generally, the proposed FO-MPA approach showed satisfying performance in both the feature selection ratio and the classification rate. The accuracy measure is used in the classification phase. In Medical Imaging 2020: Computer-Aided Diagnosis, vol. With accounting the first four previous events (\(m=4\)) from the memory data with derivative order \(\delta\), the position of prey can be modified as follow; Second: Adjusting \(R_B\) random parameter based on weibull distribution. Objective: To help improve radiologists' efficacy of disease diagnosis in reading computed tomography (CT) images, this study aims to investigate the feasibility of applying a modified deep learning (DL) method as a new strategy to automatically segment disease-infected regions and predict disease severity. While the second dataset, dataset 2 was collected by a team of researchers from Qatar University in Qatar and the University of Dhaka in Bangladesh along with collaborators from Pakistan and Malaysia medical doctors44. 4a, the SMA was considered as the fastest algorithm among all algorithms followed by BPSO, FO-MPA, and HHO, respectively, while MPA was the slowest algorithm. and A.A.E. Going deeper with convolutions. The given Kaggle dataset consists of chest CT scan images of patients suffering from the novel COVID-19, other pulmonary disorders, and those of healthy patients. Also, all other works do not give further statistics about their models complexity and the number of featurset produced, unlike, our approach which extracts the most informative features (130 and 86 features for dataset 1 and dataset 2) that imply faster computation time and, accordingly, lower resource consumption. J. Inception architecture is described in Fig. SharifRazavian, A., Azizpour, H., Sullivan, J. In this paper, after applying Chi-square, the feature vector is minimized for both datasets from 51200 to 2000. Cohen, J.P., Morrison, P. & Dao, L. Covid-19 image data collection. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. Compared to59 which is one of the most recent published works on X-ray COVID-19, a combination between You Only Look Once (YOLO) which is basically a real time object detection system and DarkNet as a classifier was proposed. 11314, 113142S (International Society for Optics and Photonics, 2020). Johnson et al.31 applied the flower pollination algorithm (FPA) to select features from CT images of the lung, to detect lung cancers. By submitting a comment you agree to abide by our Terms and Community Guidelines. The whale optimization algorithm. While, MPA, BPSO, SCA, and SGA obtained almost the same accuracy, followed by both bGWO, WOA, and SMA. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of CO VID-19. Computer Department, Damietta University, Damietta, Egypt, Electrical Engineering Department, Faculty of Engineering, Fayoum University, Fayoum, Egypt, State Key Laboratory for Information Engineering in Surveying, Mapping, and Remote Sensing, Wuhan University, Wuhan, China, Department of Applied Informatics, Vytautas Magnus University, Kaunas, Lithuania, Department of Mathematics, Faculty of Science, Zagazig University, Zagazig, Egypt, School of Computer Science and Robotics, Tomsk Polytechnic University, Tomsk, Russia, You can also search for this author in Nevertheless, a common mistake in COVID-19 dataset fusion, mainly on classification tasks, is that by mixing many datasets of COVID-19 and using as Control images another dataset, there will be . contributed to preparing results and the final figures. Scientific Reports Volume 10, Issue 1, Pages - Publisher. 97, 849872 (2019). They applied a fuzzy decision tree classifier, and they found that fuzzy PSO improved the classification accuracy. Zhang et al.16 proposed a kernel feature selection method to segment brain tumors from MRI images. Shi, H., Li, H., Zhang, D., Cheng, C. & Cao, X. Mirjalili, S. & Lewis, A. Image Anal. arXiv preprint arXiv:2003.13145 (2020). Multimedia Tools Appl. Accordingly, the FC is an efficient tool for enhancing the performance of the meta-heuristic algorithms by considering the memory perspective during updating the solutions. A NOVEL COMPARATIVE STUDY FOR AUTOMATIC THREE-CLASS AND FOUR-CLASS COVID-19 CLASSIFICATION ON X-RAY IMAGES USING DEEP LEARNING: Authors: Yaar, H. Ceylan, M. Keywords: Convolutional neural networks Covid-19 Deep learning Densenet201 Inceptionv3 Local binary pattern Local entropy X-ray chest classification Xception: Issue Date: 2022: Publisher: Cancer 48, 441446 (2012). Google Scholar. Fractional-order calculus (FC) gains the interest of many researchers in different fields not only in the modeling sectors but also in developing the optimization algorithms. Civit-Masot et al. Methods: We employed a public dataset acquired from 20 COVID-19 patients, which . PubMed }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! (23), the general formulation for the solutions of FO-MPA based on FC memory perspective can be written as follows: After checking the previous formula, it can be detected that the motion of the prey becomes based on some terms from the previous solutions with a length of (m), as depicted in Fig. The proposed approach selected successfully 130 and 86 out of 51 K features extracted by inception from dataset 1 and dataset 2, while improving classification accuracy at the same time. Nguyen, L.D., Lin, D., Lin, Z. For Dataset 2, FO-MPA showed acceptable (not the best) performance, as it achieved slightly similar results to the first and second ranked algorithm (i.e., MPA and SMA) on mean, best, max, and STD measures. In some cases (as exists in this work), the dataset is limited, so it is not sufficient for building & training a CNN. Inf. The model was developed using Keras library47 with Tensorflow backend48. Support Syst. arXiv preprint arXiv:2003.11597 (2020). This study presents an investigation on 16 pretrained CNNs for classification of COVID-19 using a large public database of CT scans collected from COVID-19 patients and non-COVID-19 subjects. Med. Feature selection based on gaussian mixture model clustering for the classification of pulmonary nodules based on computed tomography. They concluded that the hybrid method outperformed original fuzzy c-means, and it had less sensitive to noises. 132, 8198 (2018). A. We adopt a special type of CNN called a pre-trained model where the network is previously trained on the ImageNet dataset, which contains millions of variety of images (animal, plants, transports, objects,..) on 1000 classe categories. Book In this paper, filters of size 2, besides a stride of 2 and \(2 \times 2\) as Max pool, were adopted. Med. Number of extracted feature and classification accuracy by FO-MPA compared to other CNNs on dataset 1 (left) and on dataset 2 (right). In9, to classify ultrasound medical images, the authors used distance-based FS methods and a Fuzzy Support Vector Machine (FSVM). Deep cnns for microscopic image classification by exploiting transfer learning and feature concatenation. Our dataset consisting of 60 chest CT images of COVID-19 and non-COVID-19 patients was pre-processed and segmented using a hybrid watershed and fuzzy c-means algorithm. Purpose The study aimed at developing an AI . Finally, the sum of the features importance value on each tree is calculated then divided by the total number of trees as in Eq. (24). Furthermore, using few hundreds of images to build then train Inception is considered challenging because deep neural networks need large images numbers to work efficiently and produce efficient features. Continuing on my commitment to share small but interesting things in Google Cloud, this time I created a model for a However, some of the extracted features by CNN might not be sufficient, which may affect negatively the quality of the classification images. ISSN 2045-2322 (online). Credit: NIAID-RML Int. In order to normalize the values between 0 and 1 by dividing by the sum of all feature importance values, as in Eq. Besides, all algorithms showed the same statistical stability in STD measure, except for HHO and HGSO. For fair comparison, each algorithms was performed (run) 25 times to produce statistically stable results.The results are listed in Tables3 and4. Med. In Dataset 2, FO-MPA also is reported as the highest classification accuracy with the best and mean measures followed by the BPSO. The proposed IMF approach successfully achieves two important targets, selecting small feature numbers with high accuracy. 79, 18839 (2020). Acharya et al.11 applied different FS methods to classify Alzheimers disease using MRI images. \end{aligned}$$, $$\begin{aligned} U_i(t+1)-U_i(t)=P.R\bigotimes S_i \end{aligned}$$, $$\begin{aligned} D ^{\delta } \left[ U_{i}(t+1)\right] =P.R\bigotimes S_i \end{aligned}$$, $$D^{\delta } \left[ {U_{i} (t + 1)} \right] = U_{i} (t + 1) + \sum\limits_{{k = 1}}^{m} {\frac{{( - 1)^{k} \Gamma (\delta + 1)U_{i} (t + 1 - k)}}{{\Gamma (k + 1)\Gamma (\delta - k + 1)}}} = P \cdot R \otimes S_{i} .$$, $$\begin{aligned} \begin{aligned} U(t+1)_{i}= - \sum _{k=1}^{m} \frac{(-1)^k\Gamma (\delta +1)U_{i}(t+1-k)}{\Gamma (k+1)\Gamma (\delta -k+1)} + P.R\bigotimes S_i. Metric learning Metric learning can create a space in which image features within the. Lilang Zheng, Jiaxuan Fang, Xiaorun Tang, Hanzhang Li, Jiaxin Fan, Tianyi Wang, Rui Zhou, Zhaoyan Yan. Figure3 illustrates the structure of the proposed IMF approach. One from the well-know definitions of FC is the Grunwald-Letnikov (GL), which can be mathematically formulated as below40: where \(D^{\delta }(U(t))\) refers to the GL fractional derivative of order \(\delta\). Narayanan, S.J., Soundrapandiyan, R., Perumal, B. Lilang Zheng, Jiaxuan Fang, Xiaorun Tang, Hanzhang Li, Jiaxin Fan, Tianyi Wang, Rui Zhou, Zhaoyan Yan: PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. A combination of fractional-order and marine predators algorithm (FO-MPA) is considered an integration among a robust tool in mathematics named fractional-order calculus (FO). One of these datasets has both clinical and image data. New Images of Novel Coronavirus SARS-CoV-2 Now Available NIAID Now | February 13, 2020 This scanning electron microscope image shows SARS-CoV-2 (yellow)also known as 2019-nCoV, the virus that causes COVID-19isolated from a patient in the U.S., emerging from the surface of cells (blue/pink) cultured in the lab. On January 20, 2023, Japanese Prime Minister Fumio Kishida announced that the country would be downgrading the COVID-19 classification. Luz, E., Silva, P.L., Silva, R. & Moreira, G. Towards an efficient deep learning model for covid-19 patterns detection in x-ray images. In this experiment, the selected features by FO-MPA were classified using KNN. Med. The second one is based on Matlab, where the feature selection part (FO-MPA algorithm) was performed. They were manually aggregated from various web based repositories into a machine learning (ML) friendly format with accompanying data loader code. Although convolutional neural networks (CNNs) is considered the current state-of-the-art image classification technique, it needs massive computational cost for deployment and training. This combination should achieve two main targets; high performance and resource consumption, storage capacity which consequently minimize processing time. The Softmax activation function is used for this purpose because the output should be binary (positive COVID-19 negative COVID-19). Imaging Syst. A. https://www.sirm.org/category/senza-categoria/covid-19/ (2020). The evaluation showed that the RDFS improved SVM robustness against reconstruction kernel and slice thickness. Classification of COVID19 using Chest X-ray Images in Keras 4.6 33 ratings Share Offered By In this Guided Project, you will: Learn to Build and Train the Convolutional Neural Network using Keras with Tensorflow as Backend Learn to Visualize Data in Matplotlib Learn to make use of the Trained Model to Predict on a New Set of Data 2 hours The survey asked participants to broadly classify the findings of each chest CT into one of the four RSNA COVID-19 imaging categories, then select which imaging features led to their categorization. The authors declare no competing interests. Covid-19 Classification Using Deep Learning in Chest X-Ray Images Abstract: Covid-19 virus, which has emerged in the Republic of China in an undetermined cause, has affected the whole world quickly. arXiv preprint arXiv:2004.07054 (2020). et al. COVID-19 image classification using deep learning: Advances, challenges and opportunities COVID-19 image classification using deep learning: Advances, challenges and opportunities Comput Biol Med. The first one, dataset 1 was collected by Joseph Paul Cohen and Paul Morrison and Lan Dao42, where some COVID-19 images were collected by an Italian Cardiothoracic radiologist. The predator uses the Weibull distribution to improve the exploration capability. Test the proposed Inception Fractional-order Marine Predators Algorithm (IFM) approach on two publicity available datasets contain a number of positive negative chest X-ray scan images of COVID-19. SMA is on the second place, While HGSO, SCA, and HHO came in the third to fifth place, respectively. Apostolopoulos, I. D. & Mpesiana, T. A. Covid-19: automatic detection from x-ray images utilizing transfer learning with convolutional neural networks. In this paper, we propose an improved hybrid classification approach for COVID-19 images by combining the strengths of CNNs (using a powerful architecture called Inception) to extract features and a swarm-based feature selection algorithm (Marine Predators Algorithm) to select the most relevant features. where r is the run numbers. This paper reviews the recent progress of deep learning in COVID-19 images applications from five aspects; Firstly, 33 COVID-19 datasets and data enhancement methods are introduced; Secondly, COVID-19 classification methods . Article We can call this Task 2. Also, other recent published works39, who combined a CNN architecture with Weighted Symmetric Uncertainty (WSU) to select optimal features for traffic classification. Regarding the consuming time as in Fig. It can be concluded that FS methods have proven their advantages in different medical imaging applications19. Eng. He, K., Zhang, X., Ren, S. & Sun, J. Bukhari, S. U.K., Bukhari, S. S.K., Syed, A. where \(REfi_{i}\) represents the importance of feature i that were calculated from all trees, where \(normfi_{ij}\) is the normalized feature importance for feature i in tree j, also T is the total number of trees. M.A.E. For example, Da Silva et al.30 used the genetic algorithm (GA) to develop feature selection methods for ranking the quality of medical images. Rep. 10, 111 (2020). Also, they require a lot of computational resources (memory & storage) for building & training. Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. D.Y. Zhang, N., Ruan, S., Lebonvallet, S., Liao, Q. Initialize solutions for the prey and predator. However, it was clear that VGG19 and MobileNet achieved the best performance over other CNNs. The predator tries to catch the prey while the prey exploits the locations of its food. Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. Hence, it was discovered that the VGG-16 based DTL model classified COVID-19 better than the VGG-19 based DTL model. An image segmentation approach based on fuzzy c-means and dynamic particle swarm optimization algorithm. and pool layers, three fully connected layers, the last one performs classification. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. It classifies the chest X-ray images into three categories that includes Covid-19, Pneumonia and normal. https://keras.io (2015). While no feature selection was applied to select best features or to reduce model complexity. This algorithm is tested over a global optimization problem. CAS This stage can be mathematically implemented as below: In Eq. Early diagnosis, timely treatment, and proper confinement of the infected patients are some possible ways to control the spreading of . In Eq. Blog, G. Automl for large scale image classification and object detection. In this paper, a new ML-method proposed to classify the chest x-ray images into two classes, COVID-19 patient or non-COVID-19 person. Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. It is obvious that such a combination between deep features and a feature selection algorithm can be efficient in several image classification tasks. In this work, the MPA is enhanced by fractional calculus memory feature, as a result, Fractional-order Marine Predators Algorithm (FO-MPA) is introduced. There are three main parameters for pooling, Filter size, Stride, and Max pool. 42, 6088 (2017). Afzali, A., Mofrad, F.B. The results showed that the proposed approach showed better performances in both classification accuracy and the number of extracted features that positively affect resource consumption and storage efficiency. For each of these three categories, there is a number of patients and for each of them, there is a number of CT scan images correspondingly. Get the most important science stories of the day, free in your inbox. Hence, the FC memory is applied during updating the prey locating in the second step of the algorithm to enhance the exploitation stage. Currently, a new coronavirus, called COVID-19, has spread to many countries, with over two million infected people or so-called confirmed cases. Also, in12, an Fs method based on SVM was proposed to detect Alzheimers disease from SPECT images. Huang, P. et al. The code of the proposed approach is also available via the following link [https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing]. A. et al. They also used the SVM to classify lung CT images. For instance,\(1\times 1\) conv. Furthermore, the proposed GRAY+GRAY_HE+GRAY_CLAHE image representation was evaluated on two different datasets, SARS-CoV-2 CT-Scan and New_Data_CoV2, where it was found to be superior to RGB . In this paper, different Conv. Cite this article. For both datasets, the Covid19 images were collected from patients with ages ranging from 40-84 from both genders. The name "pangolin" comes from the Malay word pengguling meaning "one who rolls up" from guling or giling "to roll"; it was used for the Sunda pangolin (Manis javanica). Propose a novel robust optimizer called Fractional-order Marine Predators Algorithm (FO-MPA) to select efficiently the huge feature vector produced from the CNN. By filtering titles, abstracts, and content in the Google Scholar database, this literature review was able to find 19 related papers to answer two research questions, i.e. For the special case of \(\delta = 1\), the definition of Eq. IRBM https://doi.org/10.1016/j.irbm.2019.10.006 (2019). Key Definitions. Bibliographic details on CECT: Controllable Ensemble CNN and Transformer for COVID-19 image classification by capturing both local and global image features.